Program 2  : pgm2Fcgs3767OS 
Class      : CGS3767 Operating Systems
Instructor : Michael Robinson
e-mail     : michael.robinson@cs.fiu.edu 

Worth 10 points


For this assignment you can use your own laptop or the buffalo server
provided by FIU. ALL WORK TO BE SUBMITTED IN CLASS OR THE LAB

*** WORK DONE AT REMOTE LOCATIONS WILL NOT BE ACCEPTED ***


- Go into your virtual machine and load up Ubuntu
- Create a folder called : program2
- Move to your program2 folder
- Download into the program2 folder this file:
  http://users.cis.fiu.edu/~mrobi002/downloads/pseudomonas_aeruginosa/pa01nov2006/NC_002516.gbk

- *** All the following tasks MUST be done using Linux terminal commands as learned in class.***
  *** No editors or IDEs ***
    
    a - Create a linux Script file called yourLastNameFirstNameInitialPgm2.sh
    b - Write the name of the file just created with all its atributes into a new file called stats.txt
        in the same directory where your *.sh program is located.
    c - Change access rigths as follows: chmod 755 yourLastNameFirstNameInitialPgm2.sh
    d - Again, write the name of the file just created with all its atributes into a file called stats.txt
    e - In the first line of the file yourLastNameFirstNameInitialPgm2.sh write: #!/bin/bash
    f - Using block comments add to your *.sh file, the following documentation:
        
        *********************************************************************
        Author    : Your Name  
        Course    : CGS 3767 days and time
        Professor : Michael Robinson 
        Program # : Program Purpose/Description 
                    {A brief description of the program }
        Due Date  : MM/DD/YYYY 

        Certification: 
        I hereby certify that this work is my own and none of it is the work of any other person. 
 
        *********************************************************************

        Using terminal mode, without any editors or IDEs, write inside your *.sh file all the commands
        needed, so that when you execute your *.sh file the following will be execute:

    g - Display program two Starting
    h - Create a directory called dna in your current directory
    i - Find out how many words, lines/row/records, and how many bytes are in the NC_002516.gbk file
        writing that information into a new file called dnaCount.txt to be located inside the dna folder.
    j - Display the first 5 lines of the dnaCount.txt file
    k   Write the first 5 lines of the dnaCount.txt file to a new file named newFile.txt, in the current directory
    l - Using the cat command merge the following files: dnaCount.txt, NC_002516.gbk, newFile.txt
        into a new file called merged.txt in the dna folder.
    m - Write all records in the NC_002516.gbk file that contain the word tat in a new file named tatAmts.txt
    n - Count the amount of substrings ttt in the tatAmts.txt file, and merge totals to the merged.txt file
    o - Display the first 3 lines of the file merged.txt
    p - Display the last  3 lines of the file merged.txt
    q - display program two ended